FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001606044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001606044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2901116
Sequences flagged as poor quality0
Sequence length151
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGCGAAAGGGAAGCCGGTCAATATTCCGGCACCTGGATGTGGGTTT174620.6019063008855902No Hit
TCGCTATACGGCGCAAAGTGCGCCTTTGAAACGGAACTTCCCTATAGCTT145710.5022549942849579No Hit
TATCTACATTGTTCTATCAACCAGAGGCTGTTCACCTTGGAGACCTGCTG98100.3381457342622632No Hit
ATCCTAAGCTATAGGGAAGTTCCGTTTCAAAGGCGCACTTTGCGCCGTAT89600.3088466645249621No Hit
GTCTATCACCCTGAAATCGGTTTGTCCGGAGCTAGGGTTTCATGGCTGGA73960.25493637620832815No Hit
ATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGATAAGGA71290.24573302136143468No Hit
ACCAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATTGGTACGACCTG70210.24201031603010703No Hit
GTATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTCAACACCACTT68350.23559899018170938No Hit
GTTCTAAGTTGGTTGTTAACTGTACGCCGGACGGCCGAAGCCTGCCAAGG56010.1930636348219099No Hit
GTTTTAATTAGACAGTCAGATTCCCCCTGTCCGTACCAGTTCTAAGTTGG54070.18637655302304354No Hit
GTTCTATCAACCAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATTGG46550.16045549367898423No Hit
CCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCTATTTTGCCGACTT46530.16038655469136706No Hit
GCTTAGGATCGACTAACCCACGTCCAACCGCTGTTCACATGGAACCCTTC45710.15756005619906271No Hit
GTCCGTACCAGTTCTAAGTTGGTTGTTAACTGTACGCCGGACGGCCGAAG45270.15604339847148477No Hit
GTGATAGACTGTTAAGAAGAAAAGGGAACTCTGCCCGGGGCCCCCGCCGT44640.15387182036154362No Hit
TCCCTATAGCTTAGGATCGACTAACCCACGTCCAACCGCTGTTCACATGG44240.15249304060920005No Hit
GTGTAACAACTCACCTACCGAATGTACTAGCCCTGAAAATGGATGGCGCT42080.14504762994654471No Hit
TATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTCAACACCACTTT41490.14301392981183794No Hit
GCTATAGGGAAGTTCCGTTTCAAAGGCGCACTTTGCGCCGTATAGCGAAA40450.1394291024557446No Hit
ATATTGCCTTCATCCATTCTCAAACTTTAAATATGTAAGAAGCTCTTGTT39980.13780903624674093No Hit
ATCCTTAGCGGATCCCGACTTCCATGGTCACCGTCCTACTGTCAAGATGT39970.13777456675293231No Hit
CTTCTTAACAGTCTATCACCCTGAAATCGGTTTGTCCGGAGCTAGGGTTT38980.13436208686588197No Hit
TCGCAATGCTATGTTTTAATTAGACAGTCAGATTCCCCCTGTCCGTACCA38140.13146664938596045No Hit
GCCTAGGGCGTGAGCCCGGGTTGAACGGCCTCTAGTGCAGATCTTGGTGG38120.13139771039834325No Hit
GTATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG37200.12822651696795304No Hit
GCTAAGGATTGTGTAACAACTCACCTACCGAATGTACTAGCCCTGAAAAT36340.12526214050041432No Hit
TGATAGAACAATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTC36180.12471062859947689No Hit
CCCTTATCTACATTGTTCTATCAACCAGAGGCTGTTCACCTTGGAGACCT36150.12460722011805113No Hit
TCTCCAAGGTGAACAGCCTCTGGTTGATAGAACAATGTAGATAAGGGAAG36070.12433146416758242No Hit
GCCTCTGGTTGATAGAACAATGTAGATAAGGGAAGTCGGCAAAATAGATC35770.12329737935332472No Hit
GTACATGGGCAGAAATCACATTGCGTCAACACCACTTTCTGGCCATCGCA35440.12215988605764126No Hit
CACCCATACCTCGCCCTCAGGGTAGAAACCATGCCCTGAGGAGTAGGCGG35090.12095345377434064No Hit
GAATAATTCTCACGCCAGGTCGTACCAATAACCGCAGCAGGTCTCCAAGG34510.11895422313344244No Hit
CCCATACCTCGCCCTCAGGGTAGAAACCATGCCCTGAGGAGTAGGCGGAC34250.11805801629441912No Hit
GGTATCAACGCAGAGTACATGGGCAGAAATCACATTGCGTCAACACCACT33900.11685158401111848No Hit
ACATTGTTCTATCAACCAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTT33900.11685158401111848No Hit
CCCCCTGTCCGTACCAGTTCTAAGTTGGTTGTTAACTGTACGCCGGACGG33810.11654135856684117No Hit
CTATAGGGAAGTTCCGTTTCAAAGGCGCACTTTGCGCCGTATAGCGAAAG33340.11492129235783748No Hit
GGGTAGAAACCATGCCCTGAGGAGTAGGCGGACGTAGAGGTCGTGACGAA33120.1141629634940485No Hit
GTTAAGAAGAAAAGGGAACTCTGCCCGGGGCCCCCGCCGTCGTCTCCGCG32960.11361145159311106No Hit
CCTTGGAGACCTGCTGCGGTTATTGGTACGACCTGGCGTGAGAATTATTC32830.1131633481735994No Hit
CGCCAGGTCGTACCAATAACCGCAGCAGGTCTCCAAGGTGAACAGCCTCT32720.11278418374170492No Hit
ACGCAGAGTACATGGGCAGAAATCACATTGCGTCAACACCACTTTCTGGC32040.11044025816272082No Hit
GTACTAGCCCTGAAAATGGATGGCGCTCAAGCGTCTCACCCATACCTCGC30620.10554559004190112No Hit
GTCAGATTCCCCCTGTCCGTACCAGTTCTAAGTTGGTTGTTAACTGTACG30510.10516642561000664No Hit
TCCTTATCCCGAAGTTACGGATCTATTTTGCCGACTTCCCTTATCTACAT29950.10323613395672561No Hit
CTTCCAGCCATGAAACCCTAGCTCCGGACAAACCGATTTCAGGGTGATAG29680.1023054576238937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)