FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001606615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001606615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1274612
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG14240.1117202725221479No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA14020.10999425707587877No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA13970.10960198083809033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)