FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001607514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001607514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1807149
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA23300.1289323680559821No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG21610.11958062118840229No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG21230.11747786153770386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)