FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001608723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001608723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1221290
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCG16970.13895143659573075No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG15920.1303539699825594No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA13570.1111120208959379No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)