FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001608828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001608828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3137541
Sequences flagged as poor quality0
Sequence length151
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT40450.128922618062999No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC39670.12643659477278546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)