FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001609094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001609094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2020704
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG27820.13767479056803966No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA26200.12965778263417108No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG20220.10006413606347093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)