FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001610012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001610012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2959985
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44720.15108184669854746No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT32300.10912217460561455No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC31080.10500053209729103No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)