FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001610014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001610014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2697266
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44530.16509309797402258No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT29660.10996319977340017No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC28580.10595914529749753No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)