FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001615234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001615234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3013906
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG37570.1246555134765318No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA32460.10770077102603731No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)