FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001619928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001619928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1413563
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT136510.9657157127061192No Hit
ATATGGATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTT44980.31820300899217085No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA23640.16723697493496928No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)