FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001621048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001621048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1161785
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT66140.5692963844429046No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA21770.18738406848082906No Hit
ATATGGATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTT15640.13462043321268566No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)