FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001621557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001621557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5067891
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT317070.625644868841891No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT209720.41382105495165544No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT148640.29329754724401136No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT105310.20779847080373276No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT82220.1622371120452275No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT68290.13475033302807815No Hit
TCCTTAACCTATTCTCAAACTTTAAATATGTAAGAAGTCCTTGTCACTTA67940.13405971043970757No Hit
ATCCTAAGAGATAGGGAAACTCCGTTTTAAAGCGCACGATTCTTCGTGCC62040.12241778680717483No Hit
TATCTACATTGTTCTATCAACTAGAGGCTGTTCACCTTGGAGACCTGCTG57240.11294639130952105No Hit
GTCAGGAACGCACCGGACCCATCAAAATTGATGAGCTCTACCCGCCATTG56180.11085479147045585No Hit
ATCGAAAGGGAATCCGGTTAAGATTCCGGAACCAGGATGTGGATCCTTGA56120.1107363990267352No Hit
GTTCTAAGTTGGTTGTTAATCGTACGCCAGACGCCGTGAGGCAGCTGAAC54700.10793444452534594No Hit
ACTAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATGAGTACGACCAG54450.10744114267650982No Hit
GTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCAGTTCTAAGTTGG54400.10734248230674259No Hit
GGTTAAGGATGTTACATCCCCAAGGCCTCTAATCATTCGCTTTACCTCAT53090.10475758061884125No Hit
ATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGAAAAGGA51710.1020345544132658No Hit
CTCCTTAGCGGGTTCCGACTTCCATGGCCACCGTCCTGCTGTCTAGATGA51100.10083089790210564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)