FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001648552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001648552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757754
Sequences flagged as poor quality0
Sequence length35-301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACAAGCAAAC26316334.72934487973669No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAGGGCGAGG11838815.623540093486804No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGACTATACTTTTG10910014.397812482679075No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAA703589.285071408399032No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAAAGAAATTTAATAATTTTGA128131.6909181607751327No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTGTCGATGCCTTACAAGCAAAC30580.4035610501561193No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACACGCAAAC28650.37809104273946426No Hit
TCCGTAGGTGAACCTGCGGCATCGATGAAGAACGCAGC18700.24678193714582833No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACAAGCCAAC16470.21735286121881245No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAGGGCGCGG14950.1972935807663173No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTAACGGAGCCCGGAGGGCGAGG14900.19663373601459047No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGCGGGCGAGG12580.16601693953446633No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTTACTATACTTTTG12210.1611340883716879No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATCGATGCCTTACAAGCAAAC12170.16060621257030647No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN11940.1575709267123631No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTATTGATTTGACTATACTTTTG11680.15413973400338368No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACAAGCAACC11420.15070854129440425No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACAAGCACAC11020.14542978328058975No Hit
TCCGTAGGTGAACCTGCGGCAGGATCATTAACGGAGCCCGGAGGGCGAGG9950.13130910559363593No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTCCAAGCAAAC9890.13051729189156375No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGCCGATGCCTTACAAGCAAAC9810.12946154028880086No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATGCCTTACCAGCAAAC9790.12919760238811012No Hit
TCCGTAGGTGAACCTGCGGAAGGAGCATTGTCGATGCCTTACAAGCAAAC9350.12339096857291416No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATTCCTTACAAGCAAAC9330.12312703067222344No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGCCTATACTTTTG8520.11243754569424905No Hit
TCCGTAGGTGAACCTGCAGAGGGATCATTACCGAGTTTACAACTCCCAAA7990.10544319132594483No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTTGATGCCTTACAAGCAAAC7630.10069230911351178No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)