Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001662728 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 74734911 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 60 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATNGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC | 589023 | 0.7881497309871689 | TruSeq Adapter, Index 5 (98% over 50bp) |
CTTNGGTTCCCGCCTCCTCCCCGTTCACCGCCGGGGCGGCTCGTCCGCTC | 209001 | 0.2796564513203207 | No Hit |
AGANCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATG | 179062 | 0.23959619086185838 | TruSeq Adapter, Index 5 (97% over 49bp) |
CACNACCACCGTCGCTCGTGATTCTCGTCCATCCTCCGACCCGGTCCCGC | 81869 | 0.10954585869514182 | No Hit |