FastQCFastQC Report
Wed 15 May 2024
EGAF00001680964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001680964
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences201713304
Total Bases18.1 Gbp
Sequences flagged as poor quality0
Sequence length90
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4247930.21059245551795633No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)