Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001682385 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3654658 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGAATTCTCGGGTGCCAAGTCGACGTACGATCAATAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGG | 67521 | 1.8475326555863776 | TruSeq Adapter, Index 1 (96% over 27bp) |
TGGAATTCTCGGGTGCCAAGTCGACGTACGATCAATAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG | 18643 | 0.5101161312494904 | RNA PCR Primer, Index 40 (96% over 27bp) |
CGACTTGGAATTCTCGGGTGCCAAGTCGACGTACGATCAATAGGATCTCGTATGCCGTCTTCTGCTTGAAAAAAA | 4478 | 0.12252856491633418 | RNA PCR Primer, Index 40 (96% over 27bp) |