Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001682425 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3955070 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGAATTCTCGGGTGCCAAGTCGACGTACGATCTTAGGCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGG | 85175 | 2.15356491794077 | Illumina PCR Primer Index 3 (96% over 32bp) |
TGGAATTCTCGGGTGCCAAGTCGACGTACGATCTTAGGCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG | 21950 | 0.5549838561643663 | Illumina PCR Primer Index 3 (96% over 32bp) |
AGACACTCCCACATGGTCTAGCGGTTAGGATTCCTGGAATTCTCGGGTGCCAAGTCGACGTACGATCTTAGGCAT | 4510 | 0.11403085153992218 | Illumina RNA RT Primer (95% over 22bp) |