FastQCFastQC Report
Tue 7 May 2024
EGAF00001703290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Total Bases5.5 kbp
Sequences flagged as poor quality0
Sequence length1051-1143
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTTAAGTGTGTGGATAGTGAGCGGATAACAATTTCACACAGGAATTCG120.0No Hit
CCGTTAGTTGTGTGCATGTGAGCGGATAACAATTTCACACAGGAATTCGG120.0No Hit
CGCTAAGATGTGTGGATGTGAGCGGATACAATTTCACACAGGAATTCGGA120.0No Hit
CCTAGGTTGTGTGGATGTGAGCGGATAACAATTTCACACAGGAATTCGGA120.0No Hit
CCCTAAGCTGTGGGGATGTGAGCGGATACAATTTCACACAGGAATTCGGA120.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)