FastQCFastQC Report
Tue 7 May 2024
EGAF00001703321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Total Bases6.4 kbp
Sequences flagged as poor quality0
Sequence length1279-1312
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCCCCGATACGGGGTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCAT120.0No Hit
GCTACGATACGGGGTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATCA120.0No Hit
CGCCACCGCCACGGGTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATC120.0No Hit
CGCACGTACGGGTGGCGGTGTCGGGGCTGGCTTAACTATGCGGCATCAGA120.0No Hit
GGCCTCGAACGGTTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATCAG120.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)