FastQCFastQC Report
Tue 7 May 2024
EGAF00001703341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Total Bases6.5 kbp
Sequences flagged as poor quality0
Sequence length1273-1328
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTCGTACGGGGGTGGCGGGTGTCGGGGCTGGCTTAACTATGCGGCATC120.0No Hit
CCCTACGTACGGTTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATCAG120.0No Hit
CGGATCCATACGGTTGGCGGTGTCGGGGCTGGCTTACTATGCGGCATCAG120.0No Hit
CCCTCCGCGCGGTTGGCGGGTGTCGGGGCTGGCTTAACTATGCGGCATCA120.0No Hit
CGGACGCTACGTTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATCAGA120.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)