FastQCFastQC Report
Tue 7 May 2024
EGAF00001703355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Total Bases4.4 kbp
Sequences flagged as poor quality0
Sequence length265-1195
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTCGTACGGTTGGCGGTGTCGGGGCTGGCTTACTATGCGGCATCAGAG120.0No Hit
ACCCCCCCCCGGGGGGTTATGCGGGCGTGGCTGGCTAACTATCCCAAAAC120.0No Hit
CCAACGTACGGCGTGGCGGGTGTCGGGGCTGGCTTACTATGCGGCATCAG120.0No Hit
CCTCGGTTCAGCTCTAGTTGCGGGGTGTCGTGGCTGTCTTACTATGCACC120.0No Hit
GCAACGTACTGTTGCGGGTGTCGGGGCTGGCTTAACTATGCGGCATCAGA120.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)