FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001703398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5
Sequences flagged as poor quality0
Sequence length1169-1375
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGTAAGCTGTGTGTATTGTGAGCGGAAAACAATTTCACACAGGAATTCG120.0No Hit
CCGTATGCTGTGTGCATGTGAGCGGATAACAATTTCACACAGGAATTCGG120.0No Hit
GCGTAGCTGTGTGGATTGTGAGCGGAAAACAATTTCACACAGGAATTCGG120.0No Hit
GGGTAAGCTGTGTGGATGTGAGCGGAAAACAATTTCACACAGGAATTCGG120.0No Hit
CCCTGAAGCTGTGTGGATGTGAGCGGATACAATTTCACACAGGAATTCGG120.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)