FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001703433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27617767
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT738130.26726635792097164No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT694340.251410622734271No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT349060.1263896534430173No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)