FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001703439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001703439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31364288
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT669920.21359324337284497No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT666660.2125538446783807No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT341630.10892324416865448No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)