FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001707245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001707245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9806457
Sequences flagged as poor quality0
Sequence length35-51
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC164920.16817490761444218No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC134040.13668545122871592No Hit
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC111980.11419006884953456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)