FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13605141
Sequences flagged as poor quality0
Sequence length30-51
%GC26

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG597810.43940007677979964No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA330840.24317278299431075No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG311530.2289796188073317No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA301390.2215265538225587No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA258490.18999435581005739No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG187050.1374847934321298No Hit
ACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATTA169990.12494541585419806No Hit
ACTACGTTTATTTATTTATTTTTTTAATTATTTTACTTTTTTTTAATTT154060.11323660666214337No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA149760.11007603669818636No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG148560.10919401717336115No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)