FastQCFastQC Report
Wed 14 Sep 2022
EGAF00001721633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25642228
Sequences flagged as poor quality0
Sequence length30-101
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACGA1302750.5080486765814577No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCGA437330.17055070253645666No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTAA347530.1355303447110758No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCAA327430.12769171228022774No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCAA302990.11816055921505728No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATAATC257610.10046318908013767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)