FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001721639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63068037
Sequences flagged as poor quality0
Sequence length30-51
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG2989580.4740245839584321No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG2377750.37701347831707527No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1805430.28626703570938794No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1469830.2330546612700186No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA854370.13546798673946361No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG766010.12145772033462846No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATAAT728420.11549749043243569No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATCA728250.11547053541558618No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG653870.10367692274931593No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)