FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15027591
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG533830.3552332506254662No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG412240.27432207863522506No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA362090.24095012966482784No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA221960.14770165091663728No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA219490.14605800756754694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)