FastQCFastQC Report
Sun 2 Apr 2023
EGAF00001721649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70738067
Sequences flagged as poor quality0
Sequence length30-51
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA4686710.6625442564044053No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCA2366980.3346119141197341No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA2167110.3063569718409184No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG874040.12356006278769252No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG817090.11550923493569593No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG762920.10785140623082053No Hit

[OK]Adapter Content

Adapter graph