FastQCFastQC Report
Sat 1 Apr 2023
EGAF00001721655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56970728
Sequences flagged as poor quality0
Sequence length30-51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG3823280.6710955141735243No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG2326640.40839218343848444No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA2143920.376319572395143No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1177230.20663769646756136No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG1069350.18770165619087753No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATCA777360.13644901992475855No Hit
AATTTATTCCATTCCATTCCATTCCATTCCATTCCAATTAATTCCATTA642770.11282460705083494No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)