FastQCFastQC Report
Tue 27 Sep 2022
EGAF00001721659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52996066
Sequences flagged as poor quality0
Sequence length30-51
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG12243062.310182797341976No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA4231970.7985441787320592No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG3181580.6003426744921029No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG2621000.4945650116746402No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATCA1794640.3386364565249051No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1560350.29442751467627803No Hit
AATTTATTCCATTCCATTCCATTCCATTCCATTCCAATTAATTCCATTA1440900.2718881058077028No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1252410.23632131486891875No Hit
AATTTATTACATTCCATTCCATTCCATTCCATTCCATTCTATTACATTC1081580.2040868467482096No Hit
AATTTATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC928780.17525451794855867No Hit
AATAATCAATACTATATCCGACAATATTCGTATTTTATTTTCTTCCTAA895560.1689861281401529No Hit
AATTTATTCCATTACATTCCATTCCATTCCATTCCATTAATTCCAATTA844860.15941938029890748No Hit
AATTTATTCCGTTCCATTCCATTCCATTCCATTCCATTCCAATTAATTC802630.1514508642962291No Hit
AACAAACTACACAAACCCCACCCATTTACCTCTTAACAATTTCACACCC755590.14257473375476587No Hit
AATTTATTCCATTCCATTCCATTCCATTCCATTCCATTCCAATTAATTC700330.1321475446875623No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCG643810.12148260212371237No Hit
ATTAATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCC630750.11901826826164795No Hit
ACGCATACCGTTCCATTCCATTCCATTCGCTTCCGTTCCATTCGAATCG573130.10814576312136075No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA562310.10610410214222316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)