FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25935986
Sequences flagged as poor quality0
Sequence length30-51
%GC31

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAGG931630.3592036177070731No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATAA893190.34438251161918426No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAAT770930.29724337451446803No Hit
TGGTGGGGATAGTGATGATTATGGTAGTGGAGGTGAAATATGTTTGTGTGT457020.17621076754128415No Hit
TGGAGGAGGAGATTTTATTTTATATTAATATTTATTTTGATTTTTTGGTTA429260.16550749217708552No Hit
TGGAAAAAAAGAATTATTTGGATATATAGGTATGGTTTGAGTTATGATATT414500.15981655758142374No Hit
TGGAGTAATTTAGGTTGGTTTTTATTTATTTTAAATTTTTTTTTGTATGAA384120.14810310277002772No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)