FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42703662
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA2874710.6731764596675573No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG2294200.5372372982907181No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA1773720.4153554793497569No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG1109900.25990745243347047No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA1080760.2530836816758244No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACTATATTAACCA729550.17084014949350246No Hit
ACTAATTTTTATATTTTTAATAAAAATAAAATTTCACCATATTAACCAA691880.1620188919629422No Hit
ACTAATTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCAA677620.1586795998900516No Hit
ACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCGTATTAACCA671680.15728861847960485No Hit
ACTAATTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACCAA646150.15131020847813942No Hit
ACTAATTTTTTATATTTTTAATAAAAATAAAATTTCACCGTATTAACCA645150.15107603652351875No Hit
ACTAATTTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC629050.14730586805412613No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA620270.14524983829255672No Hit
ACTAATTTTTTATATTTTTAATAAAAACAAAATTTCACCATATTAACCA571900.1339229408475554No Hit
ACTAATTTTTTATATTTTTAATAAAAATAAAATTTCACCATATTAACCA487440.11414477756029448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)