FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24089120
Sequences flagged as poor quality0
Sequence length30-51
%GC28

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG713230.2960797239583679No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG598980.2486516734525794No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA549000.22790371752890928No Hit
ACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATTA453200.1881347263826989No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA335660.13934091407241112No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA310250.12879258353978892No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA301960.12535119589258553No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)