FastQCFastQC Report
Wed 14 Sep 2022
EGAF00001721691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74915189
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG1450460.19361360751556003No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATAAT1244110.16606912651585248No Hit
AAATAATCCAAATCAATTTCTATCTACTTCAAATTCCTCCCTATACAAA1045230.13952177308129063No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA986420.13167156262530422No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)