FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23302768
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG569940.24458038633007034No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG511250.219394537163997No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA390140.16742217061938736No Hit
ACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATTA317120.13608683740918676No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)