FastQCFastQC Report
Sat 1 Apr 2023
EGAF00001721725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63512413
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG1271530.20020180936913856No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1266590.19942400865796106No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA1245340.19607820600360437No Hit
ATAAACGACCTCTTTTTACTCTCTTCTCCAACCTCCCTCACTATCCCTC650950.10249177589898843No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA643430.10130775538318786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)