FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33210824
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG939230.2828084000565599No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA894090.2692164458189896No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA651210.19608366236260805No Hit
ACTACGTTTATTTATTTATTTTTTTAATTATTTTACTTTTTTTTAATTT613500.1847289305438492No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG598910.18033578450206475No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA582770.1754759231508378No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG404050.12166214243886271No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG396420.11936469868980065No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)