FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30128659
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG983160.32632053089385754No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA929650.3085600324926509No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA677060.2247229124933838No Hit
ACTACGTTTATTTATTTATTTTTTTAATTATTTTACTTTTTTTTAATTT651270.21616295634000834No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG637840.21170540647029792No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA608080.2018277680397259No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG431200.14311954607737437No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG409640.13596356877350566No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA334420.11099730658440524No Hit
ATAAACGACCTCTTTTTACTCTCTTCTCCAACCTCCCTCACTATCCCTC311190.10328703975839085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)