FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53688136
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG3225970.6008720436857782No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1786250.3327085149687447No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1648300.3070138251773167No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1083320.2017801474798827No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG1061670.19774759920888293No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA918490.17107876496215105No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG765180.14252310789854952No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG588770.10966482427328078No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA560670.1044308932610363No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)