FastQCFastQC Report
Sat 13 May 2023
EGAF00001721745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77694229
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG5370980.6912971618522658No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA2553450.32865375367841027No Hit
ACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATTA2333360.30032603837281147No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA1856270.23891993316517757No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA1513670.19482399394168645No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG1475530.18991500642859846No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA1149390.1479376286750976No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1047840.13486715982470204No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA816210.10505413471572No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTCG785440.10109373760565923No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)