FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48956180
Sequences flagged as poor quality0
Sequence length30-51
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1706270.34853005279415183No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA1293890.2642955393987031No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA962540.19661256249977022No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA817710.1670289634526223No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG659740.1347613314600935No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA516620.10552702437159109No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)