FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22659486
Sequences flagged as poor quality0
Sequence length30-51
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG935280.4127542875420917No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA699480.3086919094281309No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA522650.23065395216820012No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA440870.19456310703605545No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG367990.16239997676911117No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA274100.12096479152263206No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG236200.10423890462475628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)