FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41353091
Sequences flagged as poor quality0
Sequence length30-51
%GC29

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1964370.47502374127244806No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA892820.21590163598653364No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG884120.21379780292602552No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA706740.17090379048086152No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)