FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24997808
Sequences flagged as poor quality0
Sequence length30-51
%GC28

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG1417740.5671457273373729No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG784290.31374350903087184No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA688960.2756081653239356No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA606430.24259327057796426No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA425330.1701469184818125No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACAA396710.15869791463315502No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACAA354610.14185643797248143No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA288150.1152701068829715No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCATATTAACCA281940.11278588906675337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)