FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24016476
Sequences flagged as poor quality0
Sequence length30-51
%GC27

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG779130.3244147892471818No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG774070.3223079022917434No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA490020.2040349300205409No Hit
ACCTATTTATCTATTTATTAACTTTAAATCCAAATTATAAAACCAATTA404520.16843436980512877No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACCA295750.1231446278796273No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA243400.1013470918880855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)