FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001721781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39118694
Sequences flagged as poor quality0
Sequence length30-51
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1984990.5074274718885042No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTTA891220.22782457921524682No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTCA460950.11783368841505804No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA425980.10889422842183842No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA392750.10039956855410358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)