FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001721787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21503817
Sequences flagged as poor quality0
Sequence length30-51
%GC26

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA500310.23266102013423945No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA309380.14387213209636224No Hit
AACACAATAACTCACACCTATAATCCCAACACTTTAAAAAACCAAAACA245030.11394721225538704No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACAA224130.10422800752071132No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCG219230.10194934229583519No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)