FastQCFastQC Report
Tue 27 Sep 2022
EGAF00001721795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001721795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44614794
Sequences flagged as poor quality0
Sequence length30-51
%GC25

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTCA1030100.23088753923194175No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAACG670050.15018560883638732No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACCA557920.12505268992164348No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)